Publications

Bramante, C.T., J.B. Buse, D. Liebovitz, J. Nicklas, M.A. Puskarich, K. Cohen, H. Belani, B. Anderson, J.D. Huling, C. Tignanelli, J. Thompson, M. Pullen, L. Siegel, J. Proper, D.J. Odde, N. Klatt, N. Sherwood, S. Lindberg, E.L. Wirtz, A. Karger, K. Beckman, S. Erickson, S. Fenno, K. Hartman, M. Rose, B. Patel, G. Griffiths, N. Bhat, T.A. Murray, and D.R. Boulware, “Outpatient treatment of Covid-19 with metformin, ivermectin, and fluvoxamine and the development of Long Covid over 10-month follow-up,” Lancet Infectious Diseases, Published online June 8, 2023.

Pawlak, M.R., A.T. Smiley, M.D. Kelly, G.A. Shamsan, S.M. Anderson, B.A. Smeester, D.A. Largaespada, D.J. Odde, and W.R. Gordon, RAD-TGTs: Measurement of cellular tensions via flow cytometry and DNA sequencing enabled by force-dependent rupture and delivery of DNA tension probes. Nature Communications, 14, 2468 (2023).

Bidone, T., and D.J. Odde, “Multiscale models of integrins and cellular adhesions,” Current Opinion in Structural Biology, 80, 102576 (2023)

Boulware DR, Murray TA, Proper JL, Tignanelli CJ, Buse JB, Liebovitz DM, Nicklas JM, Cohen K, Puskarich MA, Belani HK, Siegel LK, Klatt NR, Odde DJ, Karger AB, Ingraham NE, Hartman KM, Rao V, Hagen AA, Patel B, Fenno SL, Avula N, Reddy NV, Erickson SM, Lindberg S, Fricton R, Lee S, Zaman A, Saveraid HG, Tordsen WJ, Pullen MF, Sherwood NE, Huling JD, Bramante CT; COVID-OUT study team. Impact of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Vaccination and Booster on Coronavirus Disease 2019 (COVID-19) Symptom Severity Over Time in the COVID-OUT Trial. Clin Infect Dis. 2023 Feb 8;76(3):e1-e9. doi: 10.1093/cid/ciac772. PMID: 36124697; PMCID: PMC9494422. (2023)

Bramante, C.T., J.D. Huling, C.J. Tignanelli, J.B. Buse, D.M. Liebovitz, J.M. Nicklas, K. Cohen, M.A. Puskarich, H.K. Belani, J.L. Proper, L.K. Siegel, N.R. Klatt, D.J. Odde, D.G. Luke, B. Anderson, A.B. Karger, N.E. Ingraham, K.M. Hartman, V. Rao, A.A. Hagen, B. Patel, S.L. Fenno, N. Avula, N.V. Reddy, S.M. Erickson, S. Lindberg, R. Fricton, S. Lee, A. Zaman, H.G. Saveraid, W.J. Tordsen, M.F. Pullen, M. Biros, N.E. Sherwood, J.L. Thompson, D.R. Boulware, and T.A. Murray, Randomized Trial of Metformin, Ivermectin, and Fluvoxamine for Covid-19. New England Journal of Medicine, 2022. 387(7): p. 599-610.

Isomursu, A., K.-Y. Park, J. Hou, B. Cheng, G. Shamsan, B. Fuller, J. Kasim, M.M. Mahmoodi, T.J. Lu, G.M. Genin, F. Xu, M. Lin, M. Distefano, J. Ivaska, and D.J. Odde, “Negative durotaxis: cell movement toward softer environments,” Nature Materials (2022). 

Lee SH, Hou JC, Hamidzadeh A, Yousafzai MS, Ajeti V, Chang H, Odde DJ, Murrell M, Levchenko A. A molecular clock controls periodically driven cell migration in confined spaces. Cell Systems 2022 Jul 20;13(7):514-529.e10. doi: 10.1016/j.cels.2022.05.005. Epub 2022 Jun 8. PMID: 35679858.

Ramirez MP, Anderson MJM, Kelly MD, Sundby LJ, Hagerty AR, Wenthe SJ, Odde DJ, Ervasti JM, Gordon WR. Dystrophin missense mutations alter focal adhesion tension and mechanotransduction. Proc Natl Acad Sci U S A. 2022 Jun 21;119(25):e2205536119. doi: 10.1073/pnas.2205536119. Epub 2022 Jun 14. PMID: 35700360; PMCID: PMC9231619.

Bramante CT, Proper JL, Boulware DR, Karger AB, Murray T, Rao V, Hagen A, Tignanelli CJ, Puskarich M, Cohen K, Liebovitz DM, Klatt NR, Broedlow C, Hartman KM, Nicklas J, Ibrahim S, Zaman A, Saveraid H, Belani H, Ingraham N, Christensen G, Siegel L, Sherwood NE, Fricton R, Lee S, Odde DJ, Buse JB, Huling JD. Vaccination Against SARS-CoV-2 Is Associated With a Lower Viral Load and Likelihood of Systemic Symptoms. Open Forum Infect Dis. 2022 Feb 20;9(5):ofac066. doi: 10.1093/ofid/ofac066. PMID: 35392460; PMCID: PMC8982774.

Mulford K, M. McMahon, A.M. Gardeck, M.A. Hunt, C.C. Chen, D.J. Odde, C. Wilke, “Predicting glioblastoma cellular motility from in vivo MRI with a radiomics based regression model,” Cancers, 14:578 (2022).

Adebowale, K., Z. Gong, J.C. Hou, K.M. Wisdom, D. Garbett, H.P. Lee, S. Nam, T. Meyer, D.J. Odde, V.B. Shenoy, and O. Chaudhuri, “Enhanced substrate stress relaxation promotes filopodia-mediated cell migration,” Nature Materials, 20, 1290-1299 (2021).

Ghaderi, N., J.H. Jung, D.J. Odde, and J. Peacock, “Clinically Validated Model Predicts the Effect of Intratumoral Heterogeneity on Overall Survival for Non-Small Cell Lung Cancer (NSCLC) Patients,” Computer Methods and Programs in Biomedicine, 212:106455 (2021).

Schaller, M.A., Y. Sharma, Z. Dupee, D. Nguyen, J. Urena, R. Smolchek, J.C. Loeb, T.N. Machuca, J.A. Lednicky, D.J. Odde, R.F. Campbell, W.G. Sawyer, and B. Mehrad, “Ex vivo SARS-CoV-2 infection of human lung reveals heterogeneous host defense and therapeutic responses,” JCI Insight, 6:e148003 (2021).

Hemmat, M., and D.J., Odde, “Atomistic basis of microtubule dynamic instability assessed via multiscale modeling,” Ann Biomed Eng, 49, 1716-1734 (2021).

Praska, C.E., D.J. Odde, and E.C. Neil, “A Physical Perspective on Oncology Research: The Critically Emerging Role of Physical Science in the Fight Against Brain Cancer," Advances in Oncology, 1, 213-221 (2021).

Walker, S.A., A. Pham, S. Nizzero, M. Kim, B. Riter, J. Bletz, S. Judge, B. Phillips, D. Noble, D. Murray, E. Wetzel, S. Samson, M. McMahon, C. Flink, J. Couch, C. Tomlin, K. Swanson, A.R.A. Anderson, D. Odde, H. Shen, S. Hughes, N. Zahir, H. Enderling, and J. Wolfram, “Education and Outreach in Physical Sciences in Oncology,” Trends in Cancer, 7(1): p. 3-9 (2021).

Hemmat, M., M. Braman, D. Escalante, and D.J. Odde, “Poisson poisoning as the mechanism of action of the microtubule-targeting agent colchicine,” bioRxiv, p. 2020.03.25.007757 (2020).

Castle, B.T., C. Dock, M. Hemmat, S. Kline, C. Tignanelli, R. Rajasingham, D. Masopust, P. Provenzano, R. Langlois, T. Schacker, A. Haase, and D.J. Odde, “Biophysical modeling of the SARS-CoV-2 viral cycle reveals ideal antiviral targets,” bioRxiv, p. 2020.05.22.111237 (2020).

Karam, B.S., R.S. Morris, C.T. Bramante, M. Puskarich, E.J. Zolfaghari, S. Lotfi-Emran, N.E. Ingraham, A. Charles, D.J. Odde, and C.J. Tignanelli, “mTOR inhibition in COVID-19: A commentary and review of efficacy in RNA viruses,” J. Medical Virology, 93, 1843-1846 (2020).

Castle, B.T., K.M. McKibben, E. Rhoades, and D.J. Odde, “Tau Avoids the GTP Cap at Growing Microtubule Plus-Ends,” iScience, 23, 101782 (2020).

Prahl, L.S., M.R. Stanslaski, P. Vargas, M. Piel, and D.J. Odde, “Predicting Confined 1D Cell Migration from Parameters Calibrated to a 2D Motor-Clutch Model,” Biophysical Journal, 118(7): p. 1709-1720 (2020).

Tan, S.J., A.C. Chang, S.M. Anderson, C.M. Miller, L.S. Prahl, D.J. Odde, and A.R. Dunn, “Regulation and dynamics of force transmission at individual cell-matrix adhesion bonds,” Science Advances, 6(20): p. eaax0317 (2020).

Smeester, B.A., N.J. Slipek, E.J. Pomeroy, H.E. Bomberger, G.A. Shamsan, J.J. Peterson, M.R. Crosby, G.M. Draper, K.L. Becklin, E.P. Rahrmann, J.B. McCarthy, D.J. Odde, D.K. Wood, D.A. Largaespada, and B.S. Moriarity, SEMA4C is a novel target to limit osteosarcoma growth, progression, and metastasis. Oncogene, 39(5): p. 1049-1062 (2020).

Hou, J.C., G. Shamsan, S. Anderson, M. McMahon, V.H. Barocas, and D.J. Odde, “Modeling distributed force at cell adhesions on continuous substrates,” Cytoskeleton, 76; 571-585 (2019).

Shamsan, G.A. and D.J. Odde, Emerging technologies in mechanotransduction research. Current Opinion in Chemical Biology, 53: p. 125-130 (2019).

Liu, C.J., G.A. Shamsan, T. Akkin, and D.J. Odde, “Glioma cell migration dynamics in brain tissue assessed by multimodal optical imaging,” Biophysical Journal, 117; 1179-1188 (2019).

Hemmat, M., B.T. Castle, J.N. Sachs, and D.J. Odde, “Multiscale Computational Modeling of Tubulin-Tubulin Lateral Interaction,” Biophysical Journal, 117; 1234-1249 (2019).

Picariello, H.S., R.S. Kenchappa, V. Rai, J.F. Crish, A. Dovas, K. Pagoda, M. McMahon, E.S. Bell, U. Chandrasekharan, A. Luu, R. West, J. Lammerding, P. Canoll, D.J. Odde, P.A. Janmey, T. Egelhoff, and S.S. Rosenfeld, “Myosin IIA Suppresses Glioblastoma Development In a Mechanically-Sensitive Manner,” Proceedings of the National Academy of Sciences USA, 116; 15550-15559 (2019).

Castle, B.T., D.J. Odde, and D.K. Wood, “Rapid kinetics of sickle hemoglobin self-assembly,” Science Advances, 13; 5(3):eeau1086 (2019).

Beckmann PJ, Larson JD, Larsson AT, Ostergaard JP, Wagner S, Rahrmann EP, Shamsan GA, Otto GM, Williams RL, Wang J, Lee C, Tschida BR, Das P, Dubuc AM, Moriarity BS, Picard D, Wu X, Rodriguez FJ, Rosemarie Q, Krebs RD, Molan AM, Demer AM, Frees MM, Rizzardi AE, Schmechel SC, Eberhart CG, Jenkins RB, Wechsler-Reya RJ, Odde DJ, Huang A, Taylor MD, Sarver AL, Largaespada DA. "Sleeping Beauty insertional mutagenesis reveals important genetic drivers of central nervous system embryonal tumors." Cancer Research. 2019 Jan 23. pii: canres.1261.2018. doi: 10.1158/0008-5472.

Klank R.L., Rosenfeld S.S., Odde D.J. "A Brownian dynamics tumor progression simulator with application to glioblastoma." Convergence Science Phyiscal Oncology. 2018 Mar;4(1). pii: 015001. doi: 10.1088/2057-1739/aa9e6e.

Prahl L.S., Bangasser P.F., Stopfer L.E., Hemmat M., White F.M., Rosenfeld S.S., Odde D.J., "Microtubule-Based Control of Motor-clutch System Mechanics in Glioma Cell Migration." Cell Reports. 2018 Nov 27;25(9):2591-2604.e8. doi: 10.1016.

Prahl L.S., Odde D.J. (2018) Modeling Cell Migration Mechanics. In: Dong C., Zahir N., Konstantopoulos K. (eds) Biomechanics in Oncology. Advances in Experimental Medicine and Biology, vol 1092. Springer, Cham.

Cong H., Zhao X., Castle B.T., Pomeroy E.J., Zhou B., Lee J., Wang Y., Bian T., Miao Z., Zhang W., Sham Y.Y., Odde D.J., Eckfeldt C.E., Xing C., & Zhuang C. "An indole-chalcone inhibits multidrug-resistant cancer cell growth by targeting microtubules." Molecular Pharmaceutics, 2018, In Press.

Wu Y., Han B., Li Y., Munro E., Odde D.J., & Griffin E.E. "Rapid diffusion-state switching underlies stable cytoplasmic gradients in the Caenorhabditis elegans zygote." Proceedings of the National Academy of Sciences, 2018, In Press

Cassimeris L., Leung J.C., & Odde D.J. "Monte Carlo simulations of microtubule arrays: The critical roles of rescue transitions, the cell boundary, and tubulin concentration in shaping microtubule distributions." PLoS One, 2018, 13(5):e0197538.

Hemmat M., Castle B.T., & Odde D.J. "Microtubule dynamics: moving toward a multi-scale approach." Current Opinion in Cell Biology, 2018, 50(1):8-13.

Ray A., Morford R.K., Ghaderi N., Odde D.J., & Provenzano P.P. "Dynamics of 3D carcinoma cell invasion into aligned collagen." Integrative Biology, 2018, In Press.

Klank R.L., Rosenfeld S.S., & Odde D.J. "A Brownian dynamics tumor progression simulator with application to glioblastoma." Convergent Science Physical Oncology, 2018, 4(1):015001.

Estabridis H.E., Jana A., Nain A., & Odde D.J. "Cell migration in 1D and 2D nanofiber microenvironments." Annals of Biomedical Engineering, 2017, 46(3):392-403.

Tubman E.S., He Y., Hays T.S., & Odde D.J. "Kinesin-5 mediated chromosome congression in insect spindles." Cellular and Molecular Bioengineering, 2017. In Press.

Tubman E.S., Biggins S., & Odde D.J.. "Stochastic modeling yields a mechanistic framework for spindle attachment and error correction in budding yeast mitosis." Cell Systems, 2017, 4(6):645-650.

Bangasser B.L., Shamsan G.A., Chan C.E., Opoku K.N., Tüzel E., Schlichtmann B.W., Kasim J.A., Fuller B.J., McCullough B.R., Rosenfeld S.S., & Odde D.J.. "Shifting the optimal stiffness for cell migration." Nature Communications, 2017, 8:15313

Mekhdjian A.H.*, Kai F.*, Rubashkin M.G.*, Prahl L.S., Przybyla L.M., McGregor A.L., Bell E.S., Barnes J.M., DuFort C.C., Ou G., Chang A.C., Cassereau L., Tan S.J., Pickup M.W., Lakins J.N., Ye X., Davidson M.W., Lammerding J., Odde D.J., Dunn A.R., & Weaver V.M. "Integrin-mediated traction force enhances paxillin molecular associations and adhesion dynamics that increase the invasiveness of tumor cells into a three-dimensional extracellular matrix." Molecular Biology of the Cell, 2017, 28(11):1467-88. *Indicates authors contributed equally.

Castle B.T., McCubbin S., Prahl L.S., Bernens J.N., Sept D., Odde D.J. "Mechanisms of kinetic stabilization by the drugs paclitaxel and vinblastine." Molecular Biology of the Cell, 2017, 28(9):1238-57.

Klank R.L.*, Decker Grunke S.A.*, Bangasser B.L., Forster C.L., Price M.A., Odde T.J., SantaCruz K.S., Rosenfeld S.S., Cannoll P., Turley E.A., McCarthy J.B., Ohlfest J.R., Odde D.J. "Biphasic dependence of glioma survival and cell migration on CD44 expression level," Cell Reports, 2017, 18(1):23-31. *Indicates authors contributed equally.

Marko T.A., Shamsan G.A., Edwards E.N., Hazelton P.E., Rathe S.K., Cornax I., Overn P.R., Varshney J., Diessner B.J., Moriarity B.S., O'Sullivan M.G., Odde D.J., Largaespada D.A. "Slit-Robo GTPase-Activating Protein 2 as a metastasis suppressor in osteosarcoma," Scientific Reports, 2016, 6:39059.

Schaefer R.M., Heasley L.R., Odde D.J., McMurray M.A. "Kinetic partitioning during de novo septin filament assembly creates a critical G1 "window of opportunity" for mutant septin function," Cell Cycle, 2016, 15(18):2441-53.

Cekan P., Hasegawa K., Pan Y., Tubman E., Odde D., Chen J.Q., Herrmann M.A., Kumar S., and Kalab P. "RCC1-dependent activation of Ran accelerates cell cycle and DNA repair, inhibiting DNA damage-induced cell senescence," Molecular Biology of the Cell, 2016, 27(8):1346-57.

McCoy K.M., Tubman E.S., Claas A., Tank D., Applen Clancy S., O'Toole E.T., Berman J., and Odde D.J. "Physical limits on kinesin-5 mediated chromosome congression in the smallest mitotic spindles," Molecular Biology of the Cell, 2015, 26(22):3999-4014.

Powers J.D., Castle B.T, and Odde D.J. "The predicted role of steric specificity in crowding-mediated effects on reversible biomolecular association," Physical Biology, 2015, 12(6):066004. 

Castle B.T., and Odde D.J. "Optical control of microtubule dynamics in time and space," Cell, 2015, 162:243-5. 

Odde D.J. "Mitosis, diffusible crosslinkers, and the ideal gas law," Cell, 2015, 160:1041-3.

Castle, B. and Odde D.J. “Dynamics of microtubule assembly,” in Encyclopedia of Cell Biology, Section Editors: Douglas Lauffenburger and Jason Haugh, Overall Editors: Ralph Bradshaw and Philip A. Stahl, Elsevier Press, (In Press). 

Hepperla, A.J., Willey P.T., Coombes C.E., Schuster B.M., Gerami-Nejad M., McClellan M., Mukherjee S., Fox J., Winey M., Odde D.J., O’Toole E., and Gardner M.K. “Minus-end-directed kinesin-14 motors align antiparallel microtubules to control metaphase spindle length,” Developmental Cell, 2014, 31:61-72. 

Howard J., J.R. McIntosh, and Odde D.J. "A brief scientific biography of Prof. Alan J. Hunt." Cellular and Molecular Bioengineering, 2013, 6:356-60.

Prahl L.S., Castle B.T., Gardner M.K., Odde D.J. "Quantitative analysis of microtubule self-assembly kinetics and tip structure," Methods in Enzymology, 2014, 540:35-52. Tip Tracker code 

Castle B.T., and Odde D.J. "Brownian dynamics of subunit addition-loss kinetics and thermodynamics in linear polymer self-assembly," Biophysical Journal, 2013, 105:2528-2540. 

Bangasser B.L., and Odde, D.J. "Master equation-based analysis of a motor-clutch model for cell traction force," Cellular and Molecular Bioengineering, 2013, 6:449-459.

Coombes C.E., Yamamoto A., Kenzie M.R., Odde D.J., and Gardner M.K. "Evolving tip structures can explain age-dependent microtubule catastrophe," Current Biology, 2013, 23:1342-1348.

Bangasser B.L., Rosenfeld S.S., and Odde, D.J. "Determinants of maximal force transmission in a motor-clutch model of cell traction in a compliant microenvironment," Biophysical Journal, 2013, 105:581-592. 

Flink C. and Odde, D.J. "Science+dance=bodystorming," Trends in Cell Biology, 2012, 22:613-616. 

Seetapun D., Castle B.T., McIntyre, A.J., Tran, P.T., and Odde, D.J. "Estimating the microtubule GTP cap size in vivo," Current Biology, 2012, 22(18):1681-1687.

Hendricks A.G., Lazarus J.E., Perlson E., Gardner M.K., Odde D.J., Goldman Y.E., and Holzbaur, E. L. "Dynein tethers and stabilizes dynamic microtubule plus ends," Current Biology, 2012, 22:632-637.

Mogilner A., and Odde D.J. "Modeling cellular processes in 3-D," Trends in Cell Biology, 2011, 21:692-700.

Griffin E.E., Odde D.J., and Seydoux G. "Regulation of the MEX-5 gradient by a spatially segregated kinase/phosphatase cycle," Cell, 2011, 146:955-968. 

Gardner M.K., Charlebois B.D., Janosi I.M., Howard J., Hunt A.J., and Odde D.J. “Rapid microtubule self-assembly kinetics,” Cell, 2011, 146:582-592.

Odde D.J. “Getting cells and tissues into shape,” Cell, 2011, 144:325-326.

Demchouk A., Gardner M.K., and Odde D.J. “Microtubule tip tracking and tip structures at the nanometer scale using digital fluorescence microscopy,” Cellular and Molecular Bioengineering, 2011, 4:192-204. Tip tracker codeTiffread code

Castle B.T., Howard S.A., and Odde D.J. “Assessment of transport mechanisms underlying the bicoid morphogen gradient,” Cellular and Molecular Bioengineering, 2011, 4:116-121.

Gardner M.K., and Odde D.J. “Stochastic simulation and graphic visualization of mitotic processes,” Methods, 2010, 51:251-256. Model Convolution plugin.

Seetapun D., and Odde D.J. “Cell-length-dependent microtubule accumulation during polarization,” Current Biology, 2010, 20:979-988. 

Gardner M.K., Sprague B.L., Pearson C.G., Cosgrove B.D., Bicek A.D., Bloom K., Salmon E.D., and Odde D.J. “Model convolution: A computational approach to digital image interpretation,” Cellular and Molecular Bioengineering, 2010, 3:163-170.

Bicek A.D., Tüzel E., Demtchouk A.O., Uppalapati M., Hancock W.O., Kroll D.M., and Odde D.J. “Anterograde microtubule transport drives microtubule bending in LLC-PK1 epithelial cells,” Molecular Biology of the Cell, 2009, 20:2943-53.  

Chan C.E. and Odde D.J. “Traction dynamics of filopodia on compliant substrates,” Science, 2008, 322:1687-91. BeadTracker and FlowTracker codes.

Gardner M.K., Bouck D.C., Paliulis L.V., Meehl J.B., O'Toole E.T., Haase J., Soubry A., Joglekar A.P., Winey M., Salmon E.D., Bloom K., and Odde D.J. “Chromosome congression by kinesin-5 motor-mediated disassembly of longer kinetochore microtubules,” Cell, 2008, 135:894-906.

Gardner M.K., Haase J., Anderson M.B., Molk J.N., Mythreye K., O’Toole E.T., Winey M., Salmon E.D., Odde D.J., and Bloom K. “The microtubule-based motor Kar3 and plus-end binding protein Bim1 provide structural support for the anaphase spindle,” The Journal of Cell Biology, 2008, 180:91-100.

Gardner M.K., Hunt A.J., Goodson H.V., and Odde D.J. “Microtubule assembly dynamics: new insights at the nanoscale,” Current Opinion in Cell Biology, 2008, 20:64-70.

Lipkow K. and Odde D.J. “Model for protein concentration gradients in the cytoplasm,” Cellular and Molecular Bioengineering, 2008, 1:84-92.

Gardner M.K., Odde D.J., and Bloom K. “Kinesin-8 molecular motors: putting the brakes on chromosome oscillations,” Trends in Cell Biology, 2008, 18:307-310.

Gardner M.K. and Odde D.J. “Dam1 complexes go it alone on disassembling microtubules,” Nature Cell Biology, 2008, 10:379-81. 

Schek H.T. 3rd,* Gardner M.K.,* Cheng J., Odde D.J.,** and Hunt A.J.,** “Microtubule assembly dynamics at the nanoscale,” Current Biology, 2007, 17:1445-55. *Denotes authors contributed equally. **Denotes authors co-directed the project equally.

Gardner M., Odde D.J., and Bloom K. “Hypothesis testing via integrated computer modeling and digital fluorescence microscopy,” Methods, 2007, 41:231-237.

Bicek A.D., Tüzel E., Kroll D.M., and Odde D.J. “Analysis of microtubule curvature,” Methods in Cell Biology, 2007, 83:237-68.

DeSilva M.N., Paulsen J., Renn M.J., and Odde D.J. “Two-step cell patterning on planar and complex curved surfaces by precision spraying of polymers,” Biotechnology and Bioengineering, 2006, 93:919-927. 

Gardne, M.K., and Odde, D.J., “Asymmetric division: motor persistence pays off,” Current Biology, 2006, 16:R1021-1023. 

Nahmias Y., and Odde D.J. “Micropatterning of hepatic-endothelial sinusoid-like structures by laser-guided direct writing,” Nature Protocols, 2006, 1:2288-2296.

Nahmias Y., Schwartz R.E., Hu W.S., Verfaillie C.M.0, and Odde D.J. “Endothelium-mediated hepatocyte recruitment in the establishment of liver-like tissue in vitro,” Tissue Engineering, 2006, 12:1627-1638.

Shimogawa M.M., Graczyk B., Gardner M.K., Francis S.E., White E.A., Ess M., Molk J.N., Ruse C., Niessen S., Yates J.R. 3rd, Muller E.G., Bloom K., Odde D.J., and Davis T.N. “Mps1 phosphorylation of dam1 couples kinetochores to microtubule plus ends at metaphase,” Current Biology, 2006, 16:1489-1501.

Gardner M.K., and D. J. Odde, “Modeling of chromosome motility in mitosis,” Current Opinion in Cell Biology, 2006 18:639-647.

Meyers J.*, Craig J.*, and Odde D.J. “Potential for control of signaling pathways via cell size and shape,” Current Biology, 2006, 16:1685-1693. *Denotes authors contributed equally.

Pearson C.*, Gardner M.*, Paliulis L., Salmon E.D., Odde D.J., and Bloom K., “Measuring nanometer scale gradients in spindle microtubule dynamics using model convolution microscopy,” Molecular Biology of the Cell, 2006, 17:4069-4079. *Authors contributed equally.

Nahmias Y.K., Arneja A., Tower T., Renn M.J., and Odde D.J. “Cell patterning on biological gels via cell spraying through a mask,” Tissue Engineering, 2005, 11:701-708.

Nahmias Y.K., Schwartz R., Verfaillie C.M., and Odde D.J. “Laser-guided direct writing for three-dimensional tissue engineering,” Biotechnology and Bioengineering, 2005, 92:129-136.

Odde D.J. “Mitotic spindle: disturbing a subtle balance,” Current Biology, 2005, 15:R956-9.

Fischer T.M., Steinmetz P.N., and Odde D.J. “Robust micromechanical neurite elicitation in synapse-competent neurons via magnetic bead force application,” Annals of Biomedical Engineering, 2005, 9:1229-1237. 

VanBuren V., Cassimeris L.U., and Odde D.J. “A mechanochemical model of microtubule structure and self-assembly kinetics,” Biophysical Journal, 2005, 89:2911-2926.

Gardner M., Pearson C., Sprague B., Zarzar T., Bloom K., Salmon E.D., and Odde D.J. “Tension-dependent regulation of microtubule dynamics at kinetochores can explain metaphase congression in yeast,” Molecular Biology of the Cell, 2005, 16:3764-3775.

Odde D.J., “Chromosome capture: take me to your kinetochore,” Current Biology, 2005, 15:R328-30.

Nahmias Y.K., Gao B.Z., and Odde D.J. “Dimensionless parameters for the design of optical traps and laser guidance systems,” Applied Optics, 2005, 43:3999-4006.

Pearson C.G., Yeh E., Gardner M., Odde D.J., Salmon E.D., and Bloom K. “Stable kinetochore–microtubule attachment constrains centromere positioning in metaphase,” Current Biology, 2004, 14:1962-1967.

DeSilva M.N., Desai R., and Odde D.J. “Micro-patterning of animal cells on PDMS substrates in the presence of serum without use of adhesion inhibitors,” Biomedical Microdevices, 2004, 6:219-222.

Sprague B.L., Pearson C.G., Maddox P.S., Bloom K., Salmon E.D., and Odde D.J. "Mechanisms of microtubule-based kinetochore positioning in the yeast metaphase spindle," Biophysical Journal, 2003, 84:3529-3546.

Fass J.N., and Odde D.J. “Tensile force-dependent neurite elicitation via anti-beta1 integrin antibody-coated magnetic beads,” Biophysical Journal, 2003, 85:623-36.

Baldi A., Fass J.N., DeSilva M.N., Odde D.J., and Ziaie B. “A micro-tool for mechanical manipulation of in vitro cell arrays,” Biomedical Microdevices, 2003, 5:291-295.

Gao B. Z., Fass J.N., Renn M.J., and Odde D.J. "Nano- and microscale manipulation of biological particles by laser-guided direct writing," Proceedings of the SPIE, 2002, 4608:245-250. 

Nahmias Y., and Odde D.J. “Analysis of radiation forces in laser trapping and laser-guided direct writing applications,” IEEE Journal of Quantum Electronics, 2002, 38:131-141. 

VanBuren V., Odde D.J., and Cassimeris L.U. "Estimates of lateral and longitudinal energies within the microtubule lattice," Proceedings of the National Academy of Sciences USA, 2002, 99:6035-6040. Correction in 2004, 101:14989.

Davis L.J., Odde D.J., Block S.M., and Gross S.P. "The importance of lattice defects in katanin-mediated microtubule severing in vitro," Biophysical Journal, 2002, 82:2916-2927.

Bulinski J.C., Odde D.J., Howell B.J., Salmon E.D., and Waterman-Storer C.M. "Rapid dynamics of the microtubule binding of ensconsin in vivo," Journal of Cell Science, 2001, 114:3885-3897.

Odde D.J., and Renn M.J. “Laser-guided direct writing of living cells,” Biotechnology and Bioengineering, 2000, 67:312-318.

Odde D.J., Ma L., Briggs A.H., DeMarco A., and Kirschner M.W. “Microtubule bending and breaking in living fibroblast cells,” Journal of Cell Science, 1999, 112:3283-3288.

Odde D.J., and Renn M.J. “Laser-guided direct writing for applications in biotechnology,” Trends in Biotechnology, 1999, 17:385-389.

Odde D.J., and Buettner H.M. “Autocorrelation function and power spectrum of two-state random processes used in neurite guidance,” Biophysical Journal, 1998, 75:1189-1196.

Odde D. J. “Diffusion inside microtubules,” European Biophysics Journal, 1998, 27:514-520.

Odde D.J. “Estimation of the diffusion-limited rate of microtubule assembly,” Biophysical Journal, 1997, 73:88-96.

Howell B., Odde D.J., and Cassimeris L. “Kinase and phosphatase inhibitors cause rapid alterations in microtubule dynamic instability in living cells,” Cell Motility and the Cytoskeleton, 1997, 38:201-214.

Odde D.J., and Hawkins S.S. “Computer-assisted motion analysis of fluorescent tubulin dynamics in the nerve growth cone,” Journal of Computer-Assisted Microscopy, 1997, 9:143-151.

Odde D.J., Cassimeris L., and Buettner H.M. “Spectral analysis of microtubule assembly dynamics,” American Institute of Chemical Engineers Journal, 1996, 42:1434-1442.

Odde D.J., Tanaka E.M., Hawkins S.S., and Buettner H.M. “Stochastic dynamics of the nerve growth cone and its microtubules during neurite outgrowth,” Biotechnology and Bioengineering, 1996, 50:452-461.

Odde D.J., Cassimeris L., and Buettner H.M. “Kinetics of microtubule catastrophe assessed by probabilistic analysis,” Biophysical Journal, 1995, 69:796-802